FHIR IG Statistics: StructureDefinition/nfdi4health-ex-mds-data-source

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{
  "resourceType": "StructureDefinition",
  "id": "nfdi4health-ex-mds-data-source",
  "url": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-data-source",
  "version": "0.9",
  "name": "NFDI4Health_EX_MDS_Data_Source",
  "title": "NFDI4Health EX MDS Data Source",
  "status": "draft",
  "publisher": "NFDI4Health",
  "contact": [
    {
      "telecom": [
        {
          "system": "url",
          "value": "https://www.nfdi4health.de"
        }
      ]
    }
  ],
  "description": "Extension informing about data sources from which data are generated or extracted.",
  "fhirVersion": "4.0.1",
  "mapping": [
    {
      "identity": "rim",
      "uri": "http://hl7.org/v3",
      "name": "RIM Mapping"
    },
    {
      "identity": "NFDI4Health",
      "name": "NFDI4Health to FHIR Mapping"
    }
  ],
  "kind": "complex-type",
  "abstract": false,
  "context": [
    {
      "type": "element",
      "expression": "ResearchStudy"
    },
    {
      "type": "element",
      "expression": "Library"
    }
  ],
  "type": "Extension",
  "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Extension",
  "derivation": "constraint",
  "differential": {
    "element": [
      {
        "id": "Extension",
        "path": "Extension",
        "short": "Data sources of the [RESOURCE]",
        "definition": "Group of items providing information about data sources from which the data of the [RESOURCE] are generated or extracted.",
        "max": "1",
        "mapping": [
          {
            "identity": "NFDI4Health",
            "map": "Design.dataSource"
          }
        ]
      },
      {
        "id": "Extension.extension:general",
        "path": "Extension.extension",
        "sliceName": "general",
        "short": "Type(s) of data sources",
        "definition": "Different types of data sources from which the data of the [RESOURCE] are generated or extracted.",
        "comment": "Short input help: Select all that apply.",
        "min": 0,
        "max": "*",
        "mapping": [
          {
            "identity": "NFDI4Health",
            "map": "Design.dataSource.general"
          }
        ]
      },
      {
        "id": "Extension.extension:general.extension",
        "path": "Extension.extension.extension",
        "max": "0"
      },
      {
        "id": "Extension.extension:general.url",
        "path": "Extension.extension.url",
        "fixedUri": "general"
      },
      {
        "id": "Extension.extension:general.value[x]",
        "path": "Extension.extension.value[x]",
        "min": 1,
        "type": [
          {
            "code": "Coding"
          }
        ],
        "binding": {
          "strength": "required",
          "valueSet": "https://www.nfdi4health.de/fhir/metadataschema/ValueSet/nfdi4health-vs-mds-study-data-sources-general-nci-local",
          "description": "Value set defining codes to specify the general data sources."
        }
      },
      {
        "id": "Extension.extension:general.value[x].system",
        "path": "Extension.extension.value[x].system",
        "min": 1
      },
      {
        "id": "Extension.extension:general.value[x].code",
        "path": "Extension.extension.value[x].code",
        "min": 1
      },
      {
        "id": "Extension.extension:biosamples",
        "path": "Extension.extension",
        "sliceName": "biosamples",
        "short": "Biosamples collected",
        "definition": "Specification of biosamples collected in the [RESOURCE].",
        "comment": "Short input help: Select all that apply. Cardinality 0..*, if Design.dataSource.general == 'Biological samples'; otherwise 0..0",
        "min": 0,
        "max": "*",
        "mapping": [
          {
            "identity": "NFDI4Health",
            "map": "Design.dataSource.biosamples"
          }
        ]
      },
      {
        "id": "Extension.extension:biosamples.extension",
        "path": "Extension.extension.extension",
        "max": "0"
      },
      {
        "id": "Extension.extension:biosamples.url",
        "path": "Extension.extension.url",
        "fixedUri": "biosamples"
      },
      {
        "id": "Extension.extension:biosamples.value[x]",
        "path": "Extension.extension.value[x]",
        "min": 1,
        "type": [
          {
            "code": "Coding"
          }
        ],
        "binding": {
          "strength": "required",
          "valueSet": "https://www.nfdi4health.de/fhir/metadataschema/ValueSet/nfdi4health-vs-mds-study-ds-biosamples-sct-nci",
          "description": "Value set defining codes to specify a biosample data source."
        }
      },
      {
        "id": "Extension.extension:biosamples.value[x].system",
        "path": "Extension.extension.value[x].system",
        "min": 1
      },
      {
        "id": "Extension.extension:biosamples.value[x].code",
        "path": "Extension.extension.value[x].code",
        "min": 1
      },
      {
        "id": "Extension.extension:imaging",
        "path": "Extension.extension",
        "sliceName": "imaging",
        "short": "Imaging data collected",
        "definition": "Specification of imaging data collected in the [RESOURCE].",
        "comment": "Short input help: Select all that apply. Cardinality 0..*, if Design.dataSource.general == 'Imaging data'; otherwise 0..0",
        "min": 0,
        "max": "*",
        "mapping": [
          {
            "identity": "NFDI4Health",
            "map": "Design.dataSource.imaging"
          }
        ]
      },
      {
        "id": "Extension.extension:imaging.extension",
        "path": "Extension.extension.extension",
        "max": "0"
      },
      {
        "id": "Extension.extension:imaging.url",
        "path": "Extension.extension.url",
        "fixedUri": "imaging"
      },
      {
        "id": "Extension.extension:imaging.value[x]",
        "path": "Extension.extension.value[x]",
        "min": 1,
        "type": [
          {
            "code": "Coding"
          }
        ],
        "binding": {
          "strength": "required",
          "valueSet": "https://www.nfdi4health.de/fhir/metadataschema/ValueSet/nfdi4health-vs-mds-study-data-sources-imaging-nci",
          "description": "Value set defining codes to specify an imaging data source."
        }
      },
      {
        "id": "Extension.extension:imaging.value[x].system",
        "path": "Extension.extension.value[x].system",
        "min": 1
      },
      {
        "id": "Extension.extension:imaging.value[x].code",
        "path": "Extension.extension.value[x].code",
        "min": 1
      },
      {
        "id": "Extension.extension:omics",
        "path": "Extension.extension",
        "sliceName": "omics",
        "short": "Omics technology used",
        "definition": "Specification of omics technology applied in the [RESOURCE].",
        "comment": "Short input help: Select all that apply.",
        "min": 0,
        "max": "*",
        "mapping": [
          {
            "identity": "NFDI4Health",
            "map": "Design.dataSource.omics"
          }
        ]
      },
      {
        "id": "Extension.extension:omics.extension",
        "path": "Extension.extension.extension",
        "max": "0"
      },
      {
        "id": "Extension.extension:omics.url",
        "path": "Extension.extension.url",
        "fixedUri": "omics"
      },
      {
        "id": "Extension.extension:omics.value[x]",
        "path": "Extension.extension.value[x]",
        "min": 1,
        "type": [
          {
            "code": "Coding"
          }
        ],
        "binding": {
          "strength": "required",
          "valueSet": "https://www.nfdi4health.de/fhir/metadataschema/ValueSet/nfdi4health-vs-mds-study-data-sources-omics-nci",
          "description": "NFDI4Health VS MDS Study Data Sources Omics [NCI, UMLS]"
        }
      },
      {
        "id": "Extension.extension:omics.value[x].system",
        "path": "Extension.extension.value[x].system",
        "min": 1
      },
      {
        "id": "Extension.extension:omics.value[x].code",
        "path": "Extension.extension.value[x].code",
        "min": 1
      },
      {
        "id": "Extension.extension:description",
        "path": "Extension.extension",
        "sliceName": "description",
        "short": "Additional information about data sources",
        "definition": "If needed, additional descriptive information about the data sources of the [RESOURCE], e.g. indication of the data source(s) not listed in the field 'Type(s) of data sources' or a more detailed description of the selected data sources.",
        "comment": "Short input help: You can indicate here other data source(s) not listed in the field 'Type(s) of data sources' or provide a more detailed description of the selected data sources.",
        "min": 0,
        "max": "1",
        "mapping": [
          {
            "identity": "NFDI4Health",
            "map": "Design.dataSource.description"
          }
        ]
      },
      {
        "id": "Extension.extension:description.extension",
        "path": "Extension.extension.extension",
        "max": "0"
      },
      {
        "id": "Extension.extension:description.url",
        "path": "Extension.extension.url",
        "fixedUri": "description"
      },
      {
        "id": "Extension.extension:description.value[x]",
        "path": "Extension.extension.value[x]",
        "type": [
          {
            "code": "string"
          }
        ]
      },
      {
        "id": "Extension.url",
        "path": "Extension.url",
        "fixedUri": "https://www.nfdi4health.de/fhir/metadataschema/StructureDefinition/nfdi4health-ex-mds-data-source"
      },
      {
        "id": "Extension.value[x]",
        "path": "Extension.value[x]",
        "max": "0"
      }
    ]
  }
}