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FHIR IG Statistics: StructureDefinition/mii-pr-mikrobio-resistenzgene

Packagede.medizininformatikinitiative.kerndatensatz.mikrobiologie
Resource TypeStructureDefinition
Idmii-pr-mikrobio-resistenzgene
FHIR VersionR4
Sourcehttps://simplifier.net/resolve?scope=de.medizininformatikinitiative.kerndatensatz.mikrobiologie@2025.0.1&canonical=https://www.medizininformatik-initiative.de/fhir/modul-mikrobio/StructureDefinition/mii-pr-mikrobio-resistenzgene
URLhttps://www.medizininformatik-initiative.de/fhir/modul-mikrobio/StructureDefinition/mii-pr-mikrobio-resistenzgene
Version2025.0.0
Statusactive
NameMII_PR_Mikrobio_Resistenzgene
TitleMII PR Mikrobio Resistenzgene
Realmde
DescriptionThis profile describes the identification of the presence or absence of a resistance gene in microbiology
PurposeDieses Profil beschreibt die Identifizierung des Vorhandenseins oder Nichtvorhandenseins eines Resistenzgens in der Medizininformatik-Initiative Modul Mikrobiologie.
TypeObservation
Kindresource

Resources that use this resource

CapabilityStatement
metadataMII CPS Metadata Mikrobio

Resources that this resource uses

StructureDefinition
MII-ReferenceMII-Reference
QuelleKlinischesBezugsdatumMII EX Labor Quelle Klinisches Bezugsdatum
ValueSet
mii-vs-mikrobio-qualitative-labor-ergebnisse-snomedctMII VS Mikrobio Qualitative Labor Ergebnisse [SNOMED CT]
mii-vs-mikrobio-resistenzgene-loincMII VS Mikrobio Resistenzgene [LOINC]

Narrative

No narrative content found in resource


Source

{
  "resourceType": "StructureDefinition",
  "id": "mii-pr-mikrobio-resistenzgene",
  "url": "https://www.medizininformatik-initiative.de/fhir/modul-mikrobio/StructureDefinition/mii-pr-mikrobio-resistenzgene",
  "version": "2025.0.0",
  "name": "MII_PR_Mikrobio_Resistenzgene",
  "title": "MII PR Mikrobio Resistenzgene",
  "status": "active",
  "experimental": false,
  "publisher": "https://www.Medizininformatik-Initiative.de",
  "description": "This profile describes the identification of the presence or absence of a resistance gene in microbiology",
  "purpose": "Dieses Profil beschreibt  die Identifizierung des Vorhandenseins oder Nichtvorhandenseins eines Resistenzgens  in der Medizininformatik-Initiative Modul Mikrobiologie.",
  "fhirVersion": "4.0.1",
  "kind": "resource",
  "abstract": false,
  "type": "Observation",
  "baseDefinition": "http://hl7.org/fhir/StructureDefinition/Observation",
  "derivation": "constraint",
  "differential": {
    "element": [
      {
        "id": "Observation",
        "path": "Observation",
        "constraint": [
          {
            "key": "mii-lab-2",
            "severity": "error",
            "human": "Falls kein Laborwert verfügbar ist, muss eine dataAbsentReason angegeben werden",
            "expression": "value.exists().not() implies dataAbsentReason.exists()"
          }
        ]
      },
      {
        "id": "Observation.id",
        "path": "Observation.id",
        "mustSupport": true
      },
      {
        "id": "Observation.meta",
        "path": "Observation.meta",
        "mustSupport": true
      },
      {
        "id": "Observation.meta.source",
        "path": "Observation.meta.source",
        "mustSupport": true
      },
      {
        "id": "Observation.meta.profile",
        "path": "Observation.meta.profile",
        "mustSupport": true
      },
      {
        "id": "Observation.identifier",
        "path": "Observation.identifier",
        "slicing": {
          "discriminator": [
            {
              "type": "pattern",
              "path": "type"
            }
          ],
          "rules": "open"
        },
        "min": 1,
        "mustSupport": true
      },
      {
        "id": "Observation.identifier:analyseBefundCode",
        "path": "Observation.identifier",
        "sliceName": "analyseBefundCode",
        "min": 1,
        "max": "1",
        "mustSupport": true
      },
      {
        "id": "Observation.identifier:analyseBefundCode.type",
        "path": "Observation.identifier.type",
        "min": 1,
        "patternCodeableConcept": {
          "coding": [
            {
              "system": "http://terminology.hl7.org/CodeSystem/v2-0203",
              "code": "OBI"
            }
          ]
        },
        "mustSupport": true
      },
      {
        "id": "Observation.identifier:analyseBefundCode.type.coding",
        "path": "Observation.identifier.type.coding",
        "slicing": {
          "discriminator": [
            {
              "type": "value",
              "path": "system"
            }
          ],
          "rules": "open"
        },
        "min": 1,
        "mustSupport": true
      },
      {
        "id": "Observation.identifier:analyseBefundCode.type.coding:observationInstanceV2",
        "path": "Observation.identifier.type.coding",
        "sliceName": "observationInstanceV2",
        "min": 1,
        "max": "1",
        "mustSupport": true
      },
      {
        "id": "Observation.identifier:analyseBefundCode.type.coding:observationInstanceV2.system",
        "path": "Observation.identifier.type.coding.system",
        "min": 1,
        "fixedUri": "http://terminology.hl7.org/CodeSystem/v2-0203",
        "mustSupport": true
      },
      {
        "id": "Observation.identifier:analyseBefundCode.type.coding:observationInstanceV2.code",
        "path": "Observation.identifier.type.coding.code",
        "min": 1,
        "fixedCode": "OBI",
        "mustSupport": true
      },
      {
        "id": "Observation.identifier:analyseBefundCode.system",
        "path": "Observation.identifier.system",
        "min": 1,
        "mustSupport": true
      },
      {
        "id": "Observation.identifier:analyseBefundCode.value",
        "path": "Observation.identifier.value",
        "min": 1,
        "mustSupport": true
      },
      {
        "id": "Observation.identifier:analyseBefundCode.assigner",
        "path": "Observation.identifier.assigner",
        "min": 1,
        "type": [
          {
            "code": "Reference",
            "profile": [
              "https://www.medizininformatik-initiative.de/fhir/core/StructureDefinition/MII-Reference"
            ]
          }
        ],
        "mustSupport": true
      },
      {
        "id": "Observation.status",
        "path": "Observation.status",
        "mustSupport": true
      },
      {
        "id": "Observation.category",
        "path": "Observation.category",
        "min": 1,
        "mustSupport": true
      },
      {
        "id": "Observation.category.coding",
        "path": "Observation.category.coding",
        "slicing": {
          "discriminator": [
            {
              "type": "pattern",
              "path": "$this"
            }
          ],
          "rules": "open"
        },
        "min": 3,
        "mustSupport": true
      },
      {
        "id": "Observation.category.coding:loinc-observation",
        "path": "Observation.category.coding",
        "sliceName": "loinc-observation",
        "min": 1,
        "max": "1",
        "patternCoding": {
          "system": "http://loinc.org",
          "code": "26436-6"
        },
        "mustSupport": true
      },
      {
        "id": "Observation.category.coding:observation-category",
        "path": "Observation.category.coding",
        "sliceName": "observation-category",
        "min": 1,
        "max": "1",
        "patternCoding": {
          "system": "http://terminology.hl7.org/CodeSystem/observation-category",
          "code": "laboratory"
        },
        "mustSupport": true
      },
      {
        "id": "Observation.category.coding:loinc-microbiology-studies",
        "path": "Observation.category.coding",
        "sliceName": "loinc-microbiology-studies",
        "min": 1,
        "max": "1",
        "patternCoding": {
          "system": "http://loinc.org",
          "code": "18725-2",
          "display": "Microbiology studies"
        },
        "mustSupport": true
      },
      {
        "id": "Observation.code",
        "path": "Observation.code",
        "short": "Resitenzgene",
        "definition": "Resistance gene",
        "mustSupport": true,
        "binding": {
          "strength": "extensible",
          "valueSet": "https://www.medizininformatik-initiative.de/fhir/modul-mikrobio/ValueSet/mii-vs-mikrobio-resistenzgene-loinc"
        }
      },
      {
        "id": "Observation.subject",
        "path": "Observation.subject",
        "min": 1,
        "type": [
          {
            "code": "Reference",
            "profile": [
              "https://www.medizininformatik-initiative.de/fhir/core/StructureDefinition/MII-Reference"
            ]
          }
        ],
        "mustSupport": true
      },
      {
        "id": "Observation.encounter",
        "path": "Observation.encounter",
        "mustSupport": true
      },
      {
        "id": "Observation.effective[x]",
        "path": "Observation.effective[x]",
        "min": 1,
        "type": [
          {
            "code": "dateTime"
          }
        ],
        "constraint": [
          {
            "key": "mii-lab-1",
            "severity": "error",
            "human": "Datetime must be at least to day",
            "expression": "($this as dateTime).hasValue() implies ($this as dateTime).toString().length() >= 8"
          }
        ],
        "mustSupport": true
      },
      {
        "id": "Observation.effective[x].extension:QuelleKlinischesBezugsdatum",
        "path": "Observation.effective[x].extension",
        "sliceName": "QuelleKlinischesBezugsdatum",
        "max": "1",
        "type": [
          {
            "code": "Extension",
            "profile": [
              "https://www.medizininformatik-initiative.de/fhir/core/modul-labor/StructureDefinition/QuelleKlinischesBezugsdatum"
            ]
          }
        ],
        "mustSupport": true
      },
      {
        "id": "Observation.effective[x].extension:QuelleKlinischesBezugsdatum.url",
        "path": "Observation.effective[x].extension.url",
        "fixedUri": "https://www.medizininformatik-initiative.de/fhir/core/modul-labor/StructureDefinition/QuelleKlinischesBezugsdatum"
      },
      {
        "id": "Observation.issued",
        "path": "Observation.issued",
        "mustSupport": true
      },
      {
        "id": "Observation.value[x]",
        "path": "Observation.value[x]",
        "slicing": {
          "discriminator": [
            {
              "type": "type",
              "path": "$this"
            }
          ],
          "ordered": false,
          "rules": "open"
        },
        "type": [
          {
            "code": "CodeableConcept"
          }
        ],
        "mustSupport": true
      },
      {
        "id": "Observation.value[x]:valueCodeableConcept",
        "path": "Observation.value[x]",
        "sliceName": "valueCodeableConcept",
        "min": 1,
        "type": [
          {
            "code": "CodeableConcept"
          }
        ],
        "mustSupport": true,
        "binding": {
          "strength": "required",
          "valueSet": "https://www.medizininformatik-initiative.de/fhir/modul-mikrobio/ValueSet/mii-vs-mikrobio-qualitative-labor-ergebnisse-snomedct"
        }
      },
      {
        "id": "Observation.dataAbsentReason",
        "path": "Observation.dataAbsentReason",
        "mustSupport": true
      },
      {
        "id": "Observation.interpretation",
        "path": "Observation.interpretation",
        "mustSupport": true
      },
      {
        "id": "Observation.note",
        "path": "Observation.note",
        "mustSupport": true
      },
      {
        "id": "Observation.bodySite",
        "path": "Observation.bodySite",
        "max": "0"
      },
      {
        "id": "Observation.method",
        "path": "Observation.method",
        "mustSupport": true
      },
      {
        "id": "Observation.specimen",
        "path": "Observation.specimen",
        "min": 1,
        "mustSupport": true
      },
      {
        "id": "Observation.specimen.reference",
        "path": "Observation.specimen.reference",
        "mustSupport": true
      },
      {
        "id": "Observation.specimen.identifier",
        "path": "Observation.specimen.identifier",
        "mustSupport": true
      },
      {
        "id": "Observation.device",
        "path": "Observation.device",
        "mustSupport": true
      },
      {
        "id": "Observation.referenceRange",
        "path": "Observation.referenceRange",
        "mustSupport": true
      },
      {
        "id": "Observation.component",
        "path": "Observation.component",
        "slicing": {
          "discriminator": [
            {
              "type": "pattern",
              "path": "code"
            }
          ],
          "rules": "open"
        },
        "mustSupport": true
      },
      {
        "id": "Observation.component:NamedesGensMolgen",
        "path": "Observation.component",
        "sliceName": "NamedesGensMolgen",
        "short": "Gene present by genotypic test",
        "definition": "Gen vorhanden durch genotypischen Test"
      },
      {
        "id": "Observation.component:NamedesGensMolgen.code",
        "path": "Observation.component.code",
        "patternCodeableConcept": {
          "coding": [
            {
              "system": "http://loinc.org",
              "code": "92249-2"
            }
          ]
        }
      },
      {
        "id": "Observation.component:NamedesGensMolgen.value[x]",
        "path": "Observation.component.value[x]",
        "type": [
          {
            "code": "CodeableConcept"
          }
        ],
        "binding": {
          "strength": "example",
          "valueSet": "https://www.ncbi.nlm.nih.gov/pathogens/refgene/"
        }
      },
      {
        "id": "Observation.component:NamedesGens",
        "path": "Observation.component",
        "sliceName": "NamedesGens",
        "short": "Name des vermuteten Gens gemäß dem phänotypischen Test",
        "max": "1"
      },
      {
        "id": "Observation.component:NamedesGens.code",
        "path": "Observation.component.code",
        "short": "Name des vermuteten Gens gemäß dem phänotypischen Test",
        "patternCodeableConcept": {
          "text": "Name des vermuteten Gens gemäß dem phänotypischen Test"
        }
      },
      {
        "id": "Observation.component:NamedesGens.value[x]",
        "path": "Observation.component.value[x]",
        "type": [
          {
            "code": "CodeableConcept"
          }
        ],
        "binding": {
          "strength": "preferred",
          "valueSet": "https://www.ncbi.nlm.nih.gov/pathogens/refgene/"
        }
      }
    ]
  }
}