FHIR IG analytics
Resources that use this resource
Resources that this resource uses
| StructureDefinition |
| hl7.fhir.eu.laboratory#current | specimen-focus | Specimen Focus |
| hl7.fhir.uv.xver-r5.r4.r4#0.0.1-snapshot-2 | extension-Specimen.feature | Cross-version Extension for R5.Specimen.feature for use in FHIR R4 |
| de.medizininformatikinitiative.kerndatensatz.biobank#2027.0.0-ballot.rc1 | EinstellungBlutversorgung | MII EX Biobank Einstellung Blutversorgung |
| de.medizininformatikinitiative.kerndatensatz.biobank#2027.0.0-ballot.rc1 | Substance | MII PR Biobank Substance Additiv |
| de.medizininformatikinitiative.kerndatensatz.biobank#2027.0.0-ballot.rc1 | Temperaturbedingungen | MII EX Biobank Temperaturbedingungen |
| de.medizininformatikinitiative.kerndatensatz.biobank#2027.0.0-ballot.rc1 | mii-ex-biobank-ebene | MII EX Biobank Ebene |
| de.medizininformatikinitiative.kerndatensatz.biobank#2027.0.0-ballot.rc1 | mii-ex-biobank-infektiositaetsstatus | Infektiositätsstatus |
Narrative
No narrative content found in resource
Source1
{
"resourceType": "StructureDefinition",
"id": "mii-pr-biobank-specimen-core",
"extension": [
{
"url": "https://www.medizininformatik-initiative.de/fhir/modul-meta/StructureDefinition/mii-ex-meta-license-codeable",
"valueCodeableConcept": {
"coding": [
{
"code": "CC-BY-4.0",
"system": "http://hl7.org/fhir/spdx-license",
"display": "Creative Commons Attribution 4.0 International"
}
]
}
}
],
"url": "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/SpecimenCore",
"version": "2027.0.0-ballot.rc1",
"name": "MII_PR_Biobank_Specimen_Bioprobe_Core",
"_name": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "MII_PR_Biobank_Specimen_Bioprobe_Core"
}
]
}
]
},
"title": "MII PR Biobank Specimen Bioprobe Core",
"_title": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Specimen Bioprobe Core"
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Specimen Bioprobe Core"
}
]
}
]
},
"status": "active",
"date": "2025-09-02",
"publisher": "Medizininformatik Initiative",
"contact": [
{
"telecom": [
{
"system": "url",
"value": "https://www.medizininformatik-initiative.de"
}
]
}
],
"description": "Basisiprofil zur Abbildung einer MII Bioprobe. Nicht zur direkten Implementierung gedacht, Module leiten bei Bedarf eigene Profile von diesem Profil ab.",
"_description": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Basisiprofil zur Abbildung einer MII Bioprobe. Nicht zur direkten Implementierung gedacht, Module leiten bei Bedarf eigene Profile von diesem Profil ab."
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Base profile for representing a MII bioprobe. Not intended for direct implementation, modules derive their own profiles from this profile as needed."
}
]
}
]
},
"fhirVersion": "4.0.1",
"kind": "resource",
"abstract": false,
"type": "Specimen",
"baseDefinition": "http://hl7.org/fhir/StructureDefinition/Specimen",
"derivation": "constraint",
"differential": {
"element": [
{
"id": "Specimen.id",
"path": "Specimen.id",
"mustSupport": true
},
{
"id": "Specimen.meta",
"path": "Specimen.meta",
"mustSupport": true
},
{
"id": "Specimen.meta.source",
"path": "Specimen.meta.source",
"mustSupport": true
},
{
"id": "Specimen.meta.profile",
"path": "Specimen.meta.profile",
"mustSupport": true
},
{
"id": "Specimen.extension:feature",
"path": "Specimen.extension",
"sliceName": "feature",
"min": 0,
"max": "*",
"type": [
{
"code": "Extension",
"profile": [
"http://hl7.org/fhir/5.0/StructureDefinition/extension-Specimen.feature"
]
}
]
},
{
"id": "Specimen.extension:probenebene",
"path": "Specimen.extension",
"sliceName": "probenebene",
"min": 0,
"max": "*",
"type": [
{
"code": "Extension",
"profile": [
"https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/mii-ex-biobank-ebene"
]
}
],
"mustSupport": true
},
{
"id": "Specimen.extension:infektiositaetsstatus",
"path": "Specimen.extension",
"sliceName": "infektiositaetsstatus",
"min": 0,
"max": "1",
"type": [
{
"code": "Extension",
"profile": [
"https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/mii-ex-biobank-infektiositaetsstatus"
]
}
],
"mustSupport": true
},
{
"id": "Specimen.extension:focus",
"path": "Specimen.extension",
"sliceName": "focus",
"min": 0,
"max": "1",
"type": [
{
"code": "Extension",
"profile": [
"http://hl7.eu/fhir/laboratory/StructureDefinition/specimen-focus"
]
}
],
"mustSupport": true
},
{
"id": "Specimen.identifier",
"path": "Specimen.identifier",
"mustSupport": true,
"_short": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Proben-ID"
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Specimen ID"
}
]
}
]
},
"_definition": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Einrichtungsinterner Identifier der Probe."
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Internal identifier of the specimen at the institution."
}
]
}
]
}
},
{
"id": "Specimen.status",
"path": "Specimen.status",
"min": 1,
"mustSupport": true,
"_short": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Verfügbarkeitsstatus"
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Availability status"
}
]
}
]
},
"_definition": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Der Status der Probe in Bezug auf die Verfügbarkeit für Forschung."
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "The status of the specimen in terms of its availability for research."
}
]
}
]
}
},
{
"id": "Specimen.type",
"path": "Specimen.type",
"min": 1,
"mustSupport": true,
"_short": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Probenart"
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Specimen type"
}
]
}
]
},
"_definition": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Die Art der Probe, codiert in SNOMED CT."
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "The type of the specimen, encoded as SNOMED CT code."
}
]
}
]
}
},
{
"id": "Specimen.type.coding",
"path": "Specimen.type.coding",
"slicing": {
"discriminator": [
{
"type": "value",
"path": "$this.system"
}
],
"rules": "open"
},
"min": 1
},
{
"id": "Specimen.type.coding.system",
"path": "Specimen.type.coding.system",
"min": 1,
"mustSupport": true
},
{
"id": "Specimen.type.coding.code",
"path": "Specimen.type.coding.code",
"min": 1,
"mustSupport": true
},
{
"id": "Specimen.type.coding:sct",
"path": "Specimen.type.coding",
"sliceName": "sct",
"min": 1,
"max": "*",
"mustSupport": true,
"binding": {
"strength": "extensible",
"valueSet": "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/ValueSet/mii-vs-biobank-probenart-sct"
}
},
{
"id": "Specimen.type.coding:sct.system",
"path": "Specimen.type.coding.system",
"patternUri": "http://snomed.info/sct"
},
{
"id": "Specimen.subject",
"path": "Specimen.subject",
"min": 1,
"type": [
{
"code": "Reference",
"targetProfile": [
"http://hl7.org/fhir/StructureDefinition/Patient"
]
}
],
"mustSupport": true,
"_short": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Patient:in"
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Patient"
}
]
}
]
},
"_definition": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Verweis auf die Person, von der die Probe stammt."
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Reference to the person from whom the specimen was collected."
}
]
}
]
}
},
{
"id": "Specimen.receivedTime",
"path": "Specimen.receivedTime",
"mustSupport": true
},
{
"id": "Specimen.parent",
"path": "Specimen.parent",
"mustSupport": true,
"_short": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Ist gewonnen aus"
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Derived from"
}
]
}
]
},
"_definition": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Referenz auf eine übergeordnete Probe, aus der diese Probe gewonnen wurde."
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Reference to a parent specimen from which this specimen was derived."
}
]
}
]
}
},
{
"id": "Specimen.request",
"path": "Specimen.request",
"mustSupport": true,
"_short": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Entnahme-ID"
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Collection ID"
}
]
}
]
},
"_definition": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Der Identifier der Probenentnahme."
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "The identifier for the specimen collection."
}
]
}
]
}
},
{
"id": "Specimen.collection",
"path": "Specimen.collection",
"min": 1,
"mustSupport": true,
"_short": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Probenentnahme"
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Specimen sampling"
}
]
}
]
},
"_definition": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Informationen über den Prozess der Probenentnahme, einschließlich Entnahmezeitpunkt und -stelle."
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Information about the specimen collection process, including collection time and site."
}
]
}
]
}
},
{
"id": "Specimen.collection.extension:einstellungBlutversorgung",
"path": "Specimen.collection.extension",
"sliceName": "einstellungBlutversorgung",
"min": 0,
"max": "1",
"type": [
{
"code": "Extension",
"profile": [
"https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/EinstellungBlutversorgung"
]
}
],
"mustSupport": true
},
{
"id": "Specimen.collection.collected[x]",
"path": "Specimen.collection.collected[x]",
"min": 1,
"mustSupport": true,
"_short": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Entnahmezeitpunkt"
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Sampling time"
}
]
}
]
},
"_definition": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Der Zeitpunkt, zu dem die Probe entnommen oder gesammelt wurde."
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "The time when the specimen was collected or obtained."
}
]
}
]
}
},
{
"id": "Specimen.collection.quantity",
"path": "Specimen.collection.quantity",
"mustSupport": true,
"_short": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Probenmenge"
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "Specimen quantity"
}
]
}
]
},
"_definition": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Die Menge des gesammelten Materials."
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "The amount of material collected."
}
]
}
]
}
},
{
"id": "Specimen.collection.quantity.extension:pqTranslation",
"path": "Specimen.collection.quantity.extension",
"sliceName": "pqTranslation",
"min": 0,
"max": "*",
"type": [
{
"code": "Extension",
"profile": [
"http://hl7.org/fhir/StructureDefinition/iso21090-PQ-translation"
]
}
]
},
{
"id": "Specimen.collection.quantity.extension:quantityPrecision",
"path": "Specimen.collection.quantity.extension",
"sliceName": "quantityPrecision",
"min": 0,
"max": "1",
"type": [
{
"code": "Extension",
"profile": [
"http://hl7.org/fhir/StructureDefinition/quantity-precision"
]
}
]
},
{
"id": "Specimen.collection.quantity.value",
"path": "Specimen.collection.quantity.value",
"min": 1,
"mustSupport": true
},
{
"id": "Specimen.collection.quantity.unit",
"path": "Specimen.collection.quantity.unit",
"min": 1,
"mustSupport": true
},
{
"id": "Specimen.collection.quantity.system",
"path": "Specimen.collection.quantity.system",
"min": 1,
"patternUri": "http://unitsofmeasure.org",
"mustSupport": true
},
{
"id": "Specimen.collection.quantity.code",
"path": "Specimen.collection.quantity.code",
"min": 1,
"mustSupport": true
},
{
"id": "Specimen.collection.bodySite",
"path": "Specimen.collection.bodySite",
"constraint": [
{
"key": "mii-bb-1",
"severity": "error",
"human": "Bei der Angabe der Entnahmestelle muss ein ICD-O-3 Topographiecode oder ein SNOMED CT Code angegeben werden.",
"expression": "coding.where(system = 'http://snomed.info/sct' or system = 'http://terminology.hl7.org/CodeSystem/icd-o-3').exists()",
"source": "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/StructureDefinition/SpecimenCore"
}
],
"mustSupport": true,
"_short": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Anatomische Lokalisation"
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "anatomical localisation"
}
]
}
]
},
"_definition": {
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "de-DE"
},
{
"url": "content",
"valueString": "Die Körperstelle, von der die Probe entnommen wurde."
}
]
},
{
"url": "http://hl7.org/fhir/StructureDefinition/translation",
"extension": [
{
"url": "lang",
"valueCode": "en-US"
},
{
"url": "content",
"valueString": "The body site from which the specimen was collected."
}
]
}
]
}
},
{
"id": "Specimen.collection.bodySite.coding",
"path": "Specimen.collection.bodySite.coding",
"slicing": {
"discriminator": [
{
"type": "value",
"path": "$this.system"
}
],
"rules": "open"
}
},
{
"id": "Specimen.collection.bodySite.coding.system",
"path": "Specimen.collection.bodySite.coding.system",
"min": 1,
"mustSupport": true
},
{
"id": "Specimen.collection.bodySite.coding.code",
"path": "Specimen.collection.bodySite.coding.code",
"min": 1,
"mustSupport": true
},
{
"id": "Specimen.collection.bodySite.coding:sct",
"path": "Specimen.collection.bodySite.coding",
"sliceName": "sct",
"min": 0,
"max": "*",
"mustSupport": true,
"binding": {
"strength": "required",
"valueSet": "https://www.medizininformatik-initiative.de/fhir/ext/modul-biobank/ValueSet/mii-vs-biobank-body-structures-sct"
}
},
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{
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},
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{
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{
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},
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}
}
FHIR
FHIRsmith